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Security & access: what changes when you switch

Security, offline and access rules that differ between Zendesk and Intercom. Rows where both tools are the same (4) are left out; the full side-by-side is on each tool’s page: Zendesk, Intercom.

What changesZendesk (today)Intercom (after)
Other certificationsISO/IEC 27017, ISO/IEC 27018, ISO/IEC 27701, ISO/IEC 42001, FedRAMP LI-SaaS, CSA STAR Level 2, Cyber Essentials Plus, HDS (France)sourceISO/IEC 27018, ISO/IEC 27701, ISO/IEC 42001, HIPAAsource
HIPAA (BAA)BAA availableAdvanced Security or Advanced Compliance add-onsourceBAA availableExpertsource
Single sign-on (SAML/OIDC)YesSuite TeamsourceYesExpertsource
SCIM user provisioningNosourceYessource
Two-factor authenticationYesEnforcement: Suite TeamsourceYesEnforcement: All planssource
Admin audit logYesSuite EnterprisesourceYesAll planssource
Data residency choicesUS, EU, UK, Japan, AustraliaSuite Professional (Data Center Location add-on, free)sourceUS, EU, Australiasource
EncryptionAES-256 at rest (AWS); TLS 1.2 or higher in transitsourceTLS/SSL-only endpoints in transit; data encrypted at restsource
IP allowlistingYesSuite TeamsourceYessource
Device & session controlsYesSuite TeamAdmin-set inactivity session timeout and maximum session duration, separately for team members and end users.sourceNot published
Editorial assessment

Before you cut over

  • Set up single sign-on in Intercom on Expert before you invite the team, so accounts are created through your identity provider rather than by hand.

Checked September 19, 2026 against each vendor’s own trust center, help docs and app pages. Hover or tap “source” to see the exact wording we relied on. “Not published” means we could not find the vendor saying it on its own site; it doesn’t mean the feature is missing. Plan names are the lowest plan the vendor says includes the feature. Security · Offline · Remote vs office · Download the data

CUSTOMER SUPPORT · MIGRATION GUIDE

Switching from Zendesk to Intercom

Intercom offers a genuine native import tool that pulls tickets, users, and organizations directly from Zendesk, making this one of the more automated helpdesk migrations available.

Quick verdict: A solid move for support teams that want Intercom’s AI agent (Fin) and messenger-first experience, and the native importer removes most of the historical-data risk that usually makes helpdesk migrations painful.

Why teams switch from Zendesk to Intercom

Native, vendor-built import tool

Intercom’s official Zendesk import tool moves tickets, contacts, and organizations directly, avoiding a lot of the manual CSV mapping that most helpdesk migrations require.

Unified messenger and AI agent

Intercom’s Messenger and Fin AI Agent are built together from the ground up, versus needing to bolt on separate AI/chat tools alongside a Zendesk ticketing setup.

Simpler multi-channel inbox

Teams that need chat, email, and in-app messaging under one roof often find Intercom’s unified inbox easier to configure than combining several Zendesk products.

Estimate · your inputs

Switching Cost & Friction Estimator

Estimate the real hidden cost of moving from Zendesk to Intercom, not just the subscription price.

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Estimated migration time
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Data friction rating
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Total hidden switching cost
Data mapping & cleaning labor—
Migration / cleaning tooling fees—
Team retraining overhead—
Switching friction buffer (10%)—
Assumes a blended $45/hr internal labor rate, using Intercom’s native importer. Adjust the sliders to match your team.

How to migrate your data

Intercom’s native Zendesk import handles most of the heavy lifting, but a few data types still need manual attention.

StepWhat happens
1Check your ticket volume against the import limitIntercom’s native import tool is designed for accounts migrating fewer than roughly 150,000 tickets – larger accounts may need a different approach.
2Connect Zendesk and start the importAuthenticate the Zendesk connection inside Intercom’s import tool and kick off the migration, which pulls in tickets, users, and organizations.
3Review attachment limitsConfirm which tickets have more than 10 attachments or inline images, since only the first 10 per ticket import automatically and the rest need manual handling.
4Recreate tags and custom fieldsTicket tags and certain field types (multiselect, lookup) don’t import cleanly, so plan to manually recreate your tagging taxonomy inside Intercom.
5Rebuild macros and workflowsZendesk macros, triggers, and automations have no direct equivalent import – recreate your key workflows using Intercom’s Workflows builder.
6Migrate your help center content separatelyZendesk Guide articles aren’t part of the ticket import, so export and manually rebuild your help center content in Intercom’s Articles product.
What Intercom’s importer doesn’t handle: Tags, side conversations, call recordings, and Help Center articles do not come across with the native import – and deleted, inactive, or suspended Zendesk users get mapped to a default inactive contact rather than migrating individually.

Pricing during the transition

Both platforms price per agent seat, but Intercom bundles its Fin AI agent as a separate usage-based cost on top of seat fees.

PlanZendeskIntercom
Free planNo permanent free plan (Zendesk trial only)No permanent free plan (Intercom trial only)
Entry paid tierSuite Team $55/agent/month billed annually ($69 billed monthly)Essential $29/seat/month billed annually, plus Fin at $0.99 per outcome
Mid tierSuite Professional $115/agent/month billed annually ($149 billed monthly)Advanced $85/seat/month billed annually, plus Fin at $0.99 per outcome

Intercom’s Fin AI Agent is billed at $0.99 per outcome on top of seat costs, so your effective per-agent cost depends heavily on how much AI resolution you use – get a usage-based quote before comparing headline seat prices (as of September 2026). Intercom is currently showing some visitors a $19 Essential price instead of $29; confirm the current price with Intercom before you budget.

Feature-parity checklist

Zendesk is built around mature ticketing workflows; Intercom is built around a messenger-first, AI-augmented support experience.

FeatureZendeskIntercom equivalent
AI support agentAI agents available, generally seen as newer/less matureFin AI Agent is a flagship, deeply integrated feature
Ticketing workflow maturityVery mature triggers, SLAs, and macrosWorkflows builder is capable but less battle-tested at enterprise scale
Messenger/live chatAvailable, added on top of ticketingCore product experience, built first
Help center/knowledge baseZendesk Guide is mature and widely usedIntercom Articles is solid but a secondary product
Reporting and analyticsDeep, customizable reporting at Professional+ tiersGood pre-built reports, less customizable at lower tiers

Frequently Asked Questions

Does Intercom really have a native Zendesk importer?

Yes – Intercom publishes an official tool that imports Zendesk tickets, users, and organizations directly, which is unusually well-documented for this space.

What doesn’t transfer in the native import?

Tags, side conversations, call recordings, Help Center articles, and some custom field types (multiselect, lookup) are excluded and need manual recreation.

Is there a ticket volume limit for the import tool?

Yes, Intercom recommends its native tool for accounts migrating fewer than roughly 150,000 tickets; larger volumes may need a different migration approach.

What happens to attachments during the Zendesk import?

Up to 10 attachments or inline images per ticket import automatically; anything beyond that per ticket is excluded and would need manual handling.

Will my Zendesk macros and triggers carry over?

No – macros, triggers, and automations have no direct import path and need to be manually rebuilt as Intercom Workflows.

Sources

Prices on this page were recorded from each vendor’s own pricing page on the date shown at the top of the page. Vendors change pricing often — check the live source before you buy.

Every figure is also in our open dataset (JSON and CSV, CC BY 4.0), with its source page and verification date. See how we research pricing.

Cite this page: HelpCompare, “Switching from Zendesk to Intercom: A Step-by-Step Migration Guide”, helpcompare.com/zendesk-to-intercom-migration/ (updated ).

Source links on this site are checked every month; last check . How sources are checked.

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About the author

Bill Belcamino

Founder and author, HelpCompare

Engineer by training, operator by experience, marketer by choice. Bill spent eight and a half years as an engineer at HP, was COO of Auctiva (the number one third-party selling platform on eBay, past 200,000 users) and ran Google’s $70M/year search syndication partnership at Alot.com. Then he spent 13 years building his own web properties with his own money at stake. He has bought, trialled, integrated and cancelled more SaaS tools than he can count, and started HelpCompare because the real cost of switching tools is the part nobody covers.

“I’ve sat on both sides of the table: the agency recommending the tool and the client paying for it.”

Researched and fact-checked by the HelpCompare team. Pricing on this page was last verified on September 16, 2026. No paid sponsorships, no affiliate commissions.